cido the community based coronavirus infectious disease ontology CORD-Papers-2021-10-25 (Version 1)

Title: CIDO: The community-based coronavirus infectious disease ontology
Abstract: Current COVID-19 pandemic and previous SARS/MERS outbreaks have caused a series of major crises to global public health We must integrate the large and exponentially growing amount of heterogeneous coronavirus data to better understand coronaviruses and associated disease mechanisms, in the interest of developing effective and safe vaccines and drugs Ontologies have emerged to play an important role in standard knowledge and data representation, integration, sharing, and analysis We have initiated the development of the community-based Coronavirus Infectious Disease Ontology (CIDO) As an Open Biomedical Ontology (OBO) library ontology, CIDO is an open source and interoperable with other existing OBO ontologies In this article, the general architecture and the design patterns of the CIDO are introduced, CIDO representation of coronaviruses, phenotypes, anti-coronavirus drugs and medical devices (e g ventilators) are illustrated, and an application of CIDO implemented to identify repurposable drug candidates for effective and safe COVID-19 treatment is presented Copyright 2020 for this paper by its authors
Published: 2020
Journal: CEUR Workshop Proceedings
Author Name: He, Y
Author link: https://covid19-data.nist.gov/pid/rest/local/author/he_y
Author Name: Yu, H
Author link: https://covid19-data.nist.gov/pid/rest/local/author/yu_h
Author Name: Ong, E
Author link: https://covid19-data.nist.gov/pid/rest/local/author/ong_e
Author Name: Wang, Y
Author link: https://covid19-data.nist.gov/pid/rest/local/author/wang_y
Author Name: Liu, Y
Author link: https://covid19-data.nist.gov/pid/rest/local/author/liu_y
Author Name: Huffman, A
Author link: https://covid19-data.nist.gov/pid/rest/local/author/huffman_a
Author Name: Huang, H H
Author link: https://covid19-data.nist.gov/pid/rest/local/author/huang_h_h
Author Name: Beverley, J
Author link: https://covid19-data.nist.gov/pid/rest/local/author/beverley_j
Author Name: Lin, A Y
Author link: https://covid19-data.nist.gov/pid/rest/local/author/lin_a_y
Author Name: Duncan, W D
Author link: https://covid19-data.nist.gov/pid/rest/local/author/duncan_w_d
Author Name: Arabandi, S
Author link: https://covid19-data.nist.gov/pid/rest/local/author/arabandi_s
Author Name: Xie, J
Author link: https://covid19-data.nist.gov/pid/rest/local/author/xie_j
Author Name: Hur, J
Author link: https://covid19-data.nist.gov/pid/rest/local/author/hur_j
Author Name: Yang, X
Author link: https://covid19-data.nist.gov/pid/rest/local/author/yang_x
Author Name: Chen, L
Author link: https://covid19-data.nist.gov/pid/rest/local/author/chen_l
Author Name: Omenn, G S
Author link: https://covid19-data.nist.gov/pid/rest/local/author/omenn_g_s
Author Name: Athey, B
Author link: https://covid19-data.nist.gov/pid/rest/local/author/athey_b
Author Name: Smith, B
Author link: https://covid19-data.nist.gov/pid/rest/local/author/smith_b
license: unk
license_url: [unknown license]
source_x: WHO
source_x_url: https://www.who.int/
who_covidence_id: #1107003
has_full_text: FALSE
G_ID: cido_the_community_based_coronavirus_infectious_disease_ontology
S2 ID: 231886257